BASILE, ARIANNA
BASILE, ARIANNA
Dipartimento di Scienze
A new metabolic model of Drosophila melanogaster and the integrative analysis of Parkinson’s disease
2023-01-01 Cesur, M. F.; Basile, A.; Patil, K. R.; Cakir, T.
A unified compendium of prokaryotic and viral genomes from over 300 anaerobic digestion microbiomes
2024-01-01 Centurion, V. B.; Rossi, A.; Orellana, E.; Ghiotto, G.; Kakuk, B.; Morlino, M. S.; Basile, A.; Zampieri, G.; Treu, L.; Campanaro, S.
Advances in constraint-based modelling of microbial communities
2021-01-01 Heinken, A.; Basile, A.; Thiele, I.
Analysis of the anaerobic digestion metagenome under environmental stresses stimulating prophage induction
2022-01-01 Rossi, A.; Morlino, M. S.; Gaspari, M.; Basile, A.; Kougias, P.; Treu, L.; Campanaro, S.
Genome-centric metatranscriptomics analysis reveals the role of hydrochar in anaerobic digestion of waste activated sludge
2021-01-01 Luo, G.; Shi, Z.; Campanaro, S.; Usman, M.; Treu, L.; Basile, A.; Angelidaki, I.; Zhang, S.
Genome-Scale Metabolic Modeling of the Human Microbiome in the Era of Personalized Medicine
2021-01-01 Heinken, A.; Basile, A.; Hertel, J.; Thinnes, C.; Thiele, I.
Genomic comparison of lactobacillus helveticusstrains highlights probiotic potential
2019-01-01 Fontana, A.; Falasconi, I.; Molinari, P.; Treu, L.; Basile, A.; Vezzi, A.; Campanaro, S.; Morelli, L.
Insights into Ammonia Adaptation and Methanogenic Precursor Oxidation by Genome-Centric Analysis
2020-01-01 Yan, M.; Treu, L.; Zhu, X.; Tian, H.; Basile, A.; Fotidis, I. A.; Campanaro, S.; Angelidaki, I.
Integrating metagenomic binning with flux balance analysis to unravel syntrophies in anaerobic CO2 methanation
2022-01-01 De Bernardini, N.; Basile, A.; Zampieri, G.; Kovalovszki, A.; De Diego Diaz, B.; Offer, E.; Wongfaed, N.; Angelidaki, I.; Kougias, P. G.; Campanaro, S.; Treu, L.
KEMET – A python tool for KEGG Module evaluation and microbial genome annotation expansion
2022-01-01 Palu, M.; Basile, A.; Zampieri, G.; Treu, L.; Rossi, A.; Morlino, M. S.; Campanaro, S.
Large-scale sequencing and comparative analysis of oenological Saccharomyces cerevisiae strains supported by nanopore refinement of key genomes
2021-01-01 Basile, A.; De Pascale, F.; Bianca, F.; Rossi, A.; Frizzarin, M.; De Bernardini, N.; Bosaro, M.; Baldisseri, A.; Antoniali, P.; Lopreiato, R.; Treu, L.; Campanaro, S.
Longitudinal flux balance analyses of a patient with episodic colonic inflammation reveals microbiome metabolic dynamics
2023-01-01 Basile, A.; Heinken, A.; Hertel, J.; Smarr, L.; Li, W.; Treu, L.; Valle, G.; Campanaro, S.; Thiele, I.
Microbiome structure in biofilms from a volcanic island in Maritime Antarctica investigated by genome-centric metagenomics and metatranscriptomics
2022-01-01 Centurion, V. B.; Campanaro, S.; Basile, A.; Treu, L.; Oliveira, V. M.
Modelling of microbial interactions in anaerobic digestion: from black to glass box
2023-01-01 Basile, A.; Zampieri, G.; Kovalovszki, A.; Karkaria, B.; Treu, L.; Patil, K. R.; Campanaro, S.
New insights from the biogas microbiome by comprehensive genome-resolved metagenomics of nearly 1600 species originating from multiple anaerobic digesters
2020-01-01 Campanaro, S.; Treu, L.; Rodriguez-R, L. M.; Kovalovszki, A.; Ziels, R. M.; Maus, I.; Zhu, X.; Kougias, P. G.; Basile, A.; Luo, G.; Schluter, A.; Konstantinidis, K. T.; Angelidaki, I.
New insights into the variability of lactic acid production in Lachancea thermotolerans at the phenotypic and genomic level
2020-01-01 Gatto, V.; Binati, R. L.; Lemos Junior, W. J. F.; Basile, A.; Treu, L.; de Almeida, O. G. G.; Innocente, G.; Campanaro, S.; Torriani, S.
Revealing metabolic mechanisms of interaction in the anaerobic digestion microbiome by flux balance analysis
2020-01-01 Basile, A.; Campanaro, S.; Kovalovszki, A.; Zampieri, G.; Rossi, A.; Angelidaki, I.; Valle, G.; Treu, L.
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| A new metabolic model of Drosophila melanogaster and the integrative analysis of Parkinson’s disease | 1-gen-2023 | Cesur, M. F.; Basile, A.; Patil, K. R.; Cakir, T. | |
| A unified compendium of prokaryotic and viral genomes from over 300 anaerobic digestion microbiomes | 1-gen-2024 | Centurion, V. B.; Rossi, A.; Orellana, E.; Ghiotto, G.; Kakuk, B.; Morlino, M. S.; Basile, A.; Zampieri, G.; Treu, L.; Campanaro, S. | |
| Advances in constraint-based modelling of microbial communities | 1-gen-2021 | Heinken, A.; Basile, A.; Thiele, I. | |
| Analysis of the anaerobic digestion metagenome under environmental stresses stimulating prophage induction | 1-gen-2022 | Rossi, A.; Morlino, M. S.; Gaspari, M.; Basile, A.; Kougias, P.; Treu, L.; Campanaro, S. | |
| Genome-centric metatranscriptomics analysis reveals the role of hydrochar in anaerobic digestion of waste activated sludge | 1-gen-2021 | Luo, G.; Shi, Z.; Campanaro, S.; Usman, M.; Treu, L.; Basile, A.; Angelidaki, I.; Zhang, S. | |
| Genome-Scale Metabolic Modeling of the Human Microbiome in the Era of Personalized Medicine | 1-gen-2021 | Heinken, A.; Basile, A.; Hertel, J.; Thinnes, C.; Thiele, I. | |
| Genomic comparison of lactobacillus helveticusstrains highlights probiotic potential | 1-gen-2019 | Fontana, A.; Falasconi, I.; Molinari, P.; Treu, L.; Basile, A.; Vezzi, A.; Campanaro, S.; Morelli, L. | |
| Insights into Ammonia Adaptation and Methanogenic Precursor Oxidation by Genome-Centric Analysis | 1-gen-2020 | Yan, M.; Treu, L.; Zhu, X.; Tian, H.; Basile, A.; Fotidis, I. A.; Campanaro, S.; Angelidaki, I. | |
| Integrating metagenomic binning with flux balance analysis to unravel syntrophies in anaerobic CO2 methanation | 1-gen-2022 | De Bernardini, N.; Basile, A.; Zampieri, G.; Kovalovszki, A.; De Diego Diaz, B.; Offer, E.; Wongfaed, N.; Angelidaki, I.; Kougias, P. G.; Campanaro, S.; Treu, L. | |
| KEMET – A python tool for KEGG Module evaluation and microbial genome annotation expansion | 1-gen-2022 | Palu, M.; Basile, A.; Zampieri, G.; Treu, L.; Rossi, A.; Morlino, M. S.; Campanaro, S. | |
| Large-scale sequencing and comparative analysis of oenological Saccharomyces cerevisiae strains supported by nanopore refinement of key genomes | 1-gen-2021 | Basile, A.; De Pascale, F.; Bianca, F.; Rossi, A.; Frizzarin, M.; De Bernardini, N.; Bosaro, M.; Baldisseri, A.; Antoniali, P.; Lopreiato, R.; Treu, L.; Campanaro, S. | |
| Longitudinal flux balance analyses of a patient with episodic colonic inflammation reveals microbiome metabolic dynamics | 1-gen-2023 | Basile, A.; Heinken, A.; Hertel, J.; Smarr, L.; Li, W.; Treu, L.; Valle, G.; Campanaro, S.; Thiele, I. | |
| Microbiome structure in biofilms from a volcanic island in Maritime Antarctica investigated by genome-centric metagenomics and metatranscriptomics | 1-gen-2022 | Centurion, V. B.; Campanaro, S.; Basile, A.; Treu, L.; Oliveira, V. M. | |
| Modelling of microbial interactions in anaerobic digestion: from black to glass box | 1-gen-2023 | Basile, A.; Zampieri, G.; Kovalovszki, A.; Karkaria, B.; Treu, L.; Patil, K. R.; Campanaro, S. | |
| New insights from the biogas microbiome by comprehensive genome-resolved metagenomics of nearly 1600 species originating from multiple anaerobic digesters | 1-gen-2020 | Campanaro, S.; Treu, L.; Rodriguez-R, L. M.; Kovalovszki, A.; Ziels, R. M.; Maus, I.; Zhu, X.; Kougias, P. G.; Basile, A.; Luo, G.; Schluter, A.; Konstantinidis, K. T.; Angelidaki, I. | |
| New insights into the variability of lactic acid production in Lachancea thermotolerans at the phenotypic and genomic level | 1-gen-2020 | Gatto, V.; Binati, R. L.; Lemos Junior, W. J. F.; Basile, A.; Treu, L.; de Almeida, O. G. G.; Innocente, G.; Campanaro, S.; Torriani, S. | |
| Revealing metabolic mechanisms of interaction in the anaerobic digestion microbiome by flux balance analysis | 1-gen-2020 | Basile, A.; Campanaro, S.; Kovalovszki, A.; Zampieri, G.; Rossi, A.; Angelidaki, I.; Valle, G.; Treu, L. |